Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 FAM207CP-201ENST00000443486 507 ntBASIC20.54■□□□□ 0.88
CCDC27Q2M243 KRT18P43-201ENST00000469825 1281 ntBASIC20.54■□□□□ 0.88
CCDC27Q2M243 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 TIMM17BP1-201ENST00000545713 516 ntBASIC20.54■□□□□ 0.88
CCDC27Q2M243 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 AC084364.1-201ENST00000551967 1556 ntBASIC20.54■□□□□ 0.88
CCDC27Q2M243 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC27Q2M243 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC27Q2M243 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 AC112693.3-201ENST00000624819 1983 ntBASIC20.53■□□□□ 0.88
CCDC27Q2M243 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 AC132872.4-202ENST00000622924 2756 ntBASIC20.53■□□□□ 0.88
CCDC27Q2M243 AP003680.1-201ENST00000598970 3660 ntBASIC20.53■□□□□ 0.88
CCDC27Q2M243 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC27Q2M243 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC27Q2M243 OR6D1P-203ENST00000641209 4860 ntBASIC20.53■□□□□ 0.88
CCDC27Q2M243 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 AC087481.3-201ENST00000602886 1894 ntBASIC20.52■□□□□ 0.88
CCDC27Q2M243 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 AC009118.2-201ENST00000613275 655 ntBASIC20.52■□□□□ 0.88
CCDC27Q2M243 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC27Q2M243 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 AL139384.1-201ENST00000612143 3047 ntBASIC20.52■□□□□ 0.88
CCDC27Q2M243 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC27Q2M243 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC27Q2M243 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.87
CCDC27Q2M243 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC27Q2M243 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC27Q2M243 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms