Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP13P45452 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP13P45452 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP13P45452 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP13P45452 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP13P45452 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 AC139530.3-201ENST00000620344 690 ntBASIC16.55■□□□□ 0.24
MMP13P45452 AC009093.7-201ENST00000623853 1223 ntBASIC16.55■□□□□ 0.24
MMP13P45452 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP13P45452 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MMP13P45452 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP13P45452 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP13P45452 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP13P45452 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 CICP13-201ENST00000422015 2789 ntBASIC16.55■□□□□ 0.24
MMP13P45452 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MMP13P45452 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP13P45452 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.54■□□□□ 0.24
MMP13P45452 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP13P45452 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.54■□□□□ 0.24
MMP13P45452 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.54■□□□□ 0.24
MMP13P45452 AC245100.5-201ENST00000452108 331 ntBASIC16.54■□□□□ 0.24
MMP13P45452 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP13P45452 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
MMP13P45452 AC061975.2-201ENST00000581722 295 ntBASIC16.54■□□□□ 0.24
MMP13P45452 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP13P45452 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 AP3S2-216ENST00000617003 1561 ntBASIC16.54■□□□□ 0.24
MMP13P45452 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP13P45452 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 AC026748.1-201ENST00000624349 3251 ntBASIC16.54■□□□□ 0.24
MMP13P45452 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 AC007292.2-201ENST00000593524 1812 ntBASIC16.54■□□□□ 0.24
MMP13P45452 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
MMP13P45452 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP13P45452 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP13P45452 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MMP13P45452 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP13P45452 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MMP13P45452 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP13P45452 RBPMS2P1-201ENST00000437762 623 ntBASIC16.53■□□□□ 0.24
MMP13P45452 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP13P45452 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP13P45452 ALG1L8P-201ENST00000533887 760 ntBASIC16.53■□□□□ 0.24
MMP13P45452 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 RARRES2P9-201ENST00000565168 469 ntBASIC16.53■□□□□ 0.24
MMP13P45452 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
MMP13P45452 AC027612.4-201ENST00000605371 583 ntBASIC16.53■□□□□ 0.24
MMP13P45452 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.53■□□□□ 0.24
MMP13P45452 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.53■□□□□ 0.24
MMP13P45452 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms