Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.66□□□□□ -0.22
CD40P25942 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 TOMM22P5-201ENST00000416399 439 ntBASIC13.66□□□□□ -0.22
CD40P25942 AC098850.1-201ENST00000419919 790 ntBASIC13.66□□□□□ -0.22
CD40P25942 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.66□□□□□ -0.22
CD40P25942 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CD40P25942 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CD40P25942 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.66□□□□□ -0.22
CD40P25942 CTBP2P3-201ENST00000585629 1255 ntBASIC13.66□□□□□ -0.22
CD40P25942 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 TMEM261P1-201ENST00000604899 340 ntBASIC13.66□□□□□ -0.22
CD40P25942 AL391069.4-201ENST00000609583 481 ntBASIC13.66□□□□□ -0.22
CD40P25942 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 CLK3P2-201ENST00000427566 1453 ntBASIC13.66□□□□□ -0.22
CD40P25942 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CD40P25942 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
CD40P25942 KRT18P64-201ENST00000434946 1219 ntBASIC13.65□□□□□ -0.22
CD40P25942 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 INE1-201ENST00000456273 945 ntBASIC13.65□□□□□ -0.22
CD40P25942 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CD40P25942 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.65□□□□□ -0.22
CD40P25942 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 MIR8072-201ENST00000614241 80 ntBASIC13.65□□□□□ -0.22
CD40P25942 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.65□□□□□ -0.22
CD40P25942 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD40P25942 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40P25942 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms