Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 AL021578.1-201ENST00000613646 709 ntBASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 AC145423.3-201ENST00000615987 467 ntBASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CSB-PGBD3P0DP91 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 AC018892.3-201ENST00000623986 2499 ntBASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 AHCYP2-201ENST00000430630 1300 ntBASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 CALR4P-201ENST00000431943 946 ntBASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSB-PGBD3P0DP91 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 AC015910.1-201ENST00000579400 975 ntBASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 AP005019.2-201ENST00000615104 511 ntBASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.85■□□□□ 0.93
CSB-PGBD3P0DP91 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms