Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.99□□□□□ -0.17
UBCP0CG48 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.99□□□□□ -0.17
UBCP0CG48 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 RNA5SP419-201ENST00000515908 135 ntBASIC13.99□□□□□ -0.17
UBCP0CG48 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.99□□□□□ -0.17
UBCP0CG48 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
UBCP0CG48 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.99□□□□□ -0.17
UBCP0CG48 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.99□□□□□ -0.17
UBCP0CG48 AC064836.3-201ENST00000607928 673 ntBASIC13.99□□□□□ -0.17
UBCP0CG48 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.99□□□□□ -0.17
UBCP0CG48 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBCP0CG48 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.99□□□□□ -0.17
UBCP0CG48 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBCP0CG48 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBCP0CG48 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 AC090616.6-203ENST00000579186 1945 ntBASIC13.98□□□□□ -0.17
UBCP0CG48 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.98□□□□□ -0.17
UBCP0CG48 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 MRPL3P1-201ENST00000400109 1033 ntBASIC13.98□□□□□ -0.17
UBCP0CG48 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 AC098859.1-201ENST00000502915 1238 ntBASIC13.98□□□□□ -0.17
UBCP0CG48 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.98□□□□□ -0.17
UBCP0CG48 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.98□□□□□ -0.17
UBCP0CG48 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.98□□□□□ -0.17
UBCP0CG48 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 AC104581.4-201ENST00000623126 3052 ntBASIC13.98□□□□□ -0.17
UBCP0CG48 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.98□□□□□ -0.17
UBCP0CG48 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBCP0CG48 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms