Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 GRK6P1-201ENST00000400595 1711 ntBASIC16.11■□□□□ 0.17
CDH16O75309 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH16O75309 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH16O75309 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH16O75309 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH16O75309 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH16O75309 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CDH16O75309 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 EMBP1-201ENST00000458200 901 ntBASIC16.1■□□□□ 0.17
CDH16O75309 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH16O75309 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 AC073648.2-201ENST00000510116 352 ntBASIC16.1■□□□□ 0.17
CDH16O75309 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH16O75309 AF238378.1-201ENST00000526806 358 ntBASIC16.1■□□□□ 0.17
CDH16O75309 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 AL009183.1-201ENST00000603760 355 ntBASIC16.1■□□□□ 0.17
CDH16O75309 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 PMS2P7-201ENST00000506558 1336 ntBASIC16.1■□□□□ 0.17
CDH16O75309 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH16O75309 AC148477.4-201ENST00000613430 1793 ntBASIC16.1■□□□□ 0.17
CDH16O75309 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH16O75309 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDH16O75309 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH16O75309 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH16O75309 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH16O75309 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CDH16O75309 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 AC018892.3-201ENST00000623986 2499 ntBASIC16.09■□□□□ 0.17
CDH16O75309 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 MYO15B-237ENST00000642007 4893 ntBASIC16.09■□□□□ 0.17
CDH16O75309 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDH16O75309 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH16O75309 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH16O75309 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH16O75309 PRSS29P-201ENST00000440800 595 ntBASIC16.09■□□□□ 0.17
CDH16O75309 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH16O75309 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 AL662844.1-201ENST00000546340 181 ntBASIC16.09■□□□□ 0.17
CDH16O75309 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.09■□□□□ 0.17
CDH16O75309 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH16O75309 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 AC243562.2-201ENST00000561247 970 ntBASIC16.09■□□□□ 0.17
CDH16O75309 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 AC007686.3-201ENST00000619017 3487 ntBASIC16.09■□□□□ 0.17
CDH16O75309 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH16O75309 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH16O75309 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH16O75309 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH16O75309 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
CDH16O75309 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH16O75309 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH16O75309 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms