Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP2AO43633 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP2AO43633 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 AL132655.2-201ENST00000596276 594 ntBASIC17.85■□□□□ 0.45
CHMP2AO43633 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 AF228730.6-201ENST00000641497 218 ntBASIC17.85■□□□□ 0.45
CHMP2AO43633 AC084121.3-201ENST00000641716 218 ntBASIC17.85■□□□□ 0.45
CHMP2AO43633 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2AO43633 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2AO43633 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 Z97205.2-201ENST00000564697 1639 ntBASIC17.84■□□□□ 0.45
CHMP2AO43633 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 AL607033.1-201ENST00000623900 1599 ntBASIC17.84■□□□□ 0.45
CHMP2AO43633 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 AC007541.1-201ENST00000570282 1469 ntBASIC17.84■□□□□ 0.45
CHMP2AO43633 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2AO43633 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2AO43633 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 AC190387.1-201ENST00000551683 408 ntBASIC17.84■□□□□ 0.45
CHMP2AO43633 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2AO43633 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2AO43633 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CHMP2AO43633 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CHMP2AO43633 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2AO43633 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2AO43633 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHMP2AO43633 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CHMP2AO43633 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP2AO43633 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP2AO43633 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.83■□□□□ 0.45
CHMP2AO43633 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP2AO43633 FLJ16779-201ENST00000612722 7638 ntBASIC17.83■□□□□ 0.45
CHMP2AO43633 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP2AO43633 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP2AO43633 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP2AO43633 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHMP2AO43633 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms