Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A1O00337 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 AC023274.1-201ENST00000418278 595 ntBASIC15.33■□□□□ 0.04
SLC28A1O00337 ADH5P3-201ENST00000433842 1137 ntBASIC15.33■□□□□ 0.04
SLC28A1O00337 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC28A1O00337 SPCS2P4-201ENST00000436160 681 ntBASIC15.33■□□□□ 0.04
SLC28A1O00337 PHKG1P2-201ENST00000457537 863 ntBASIC15.33■□□□□ 0.04
SLC28A1O00337 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC28A1O00337 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A1O00337 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
SLC28A1O00337 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC28A1O00337 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC28A1O00337 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC28A1O00337 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
SLC28A1O00337 AL136982.4-201ENST00000437689 1740 ntBASIC15.33■□□□□ 0.04
SLC28A1O00337 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC28A1O00337 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC28A1O00337 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A1O00337 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC28A1O00337 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A1O00337 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC28A1O00337 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC28A1O00337 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A1O00337 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 AC127383.1-201ENST00000444697 1800 ntBASIC15.32■□□□□ 0.04
SLC28A1O00337 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A1O00337 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A1O00337 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC28A1O00337 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.32■□□□□ 0.04
SLC28A1O00337 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A1O00337 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
SLC28A1O00337 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A1O00337 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A1O00337 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A1O00337 PCDHA3-202ENST00000532566 4594 ntBASIC15.32■□□□□ 0.04
SLC28A1O00337 CYP4F24P-201ENST00000586049 1580 ntBASIC15.32■□□□□ 0.04
SLC28A1O00337 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A1O00337 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A1O00337 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A1O00337 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A1O00337 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A1O00337 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SLC28A1O00337 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC28A1O00337 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC28A1O00337 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC28A1O00337 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A1O00337 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A1O00337 AC112693.3-201ENST00000624819 1983 ntBASIC15.31■□□□□ 0.04
SLC28A1O00337 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC28A1O00337 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SLC28A1O00337 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A1O00337 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SLC28A1O00337 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A1O00337 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A1O00337 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC28A1O00337 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms