Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB1Q9Y5F3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 BNIP3P1-202ENST00000550043 1585 ntBASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 AC009407.1-201ENST00000568958 598 ntBASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 AL132655.2-201ENST00000596276 594 ntBASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB1Q9Y5F3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 TP53TG3HP-202ENST00000569755 579 ntBASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AC007541.1-201ENST00000570282 1469 ntBASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB1Q9Y5F3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms