Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 LINC00552-201ENST00000625151 2579 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 MIR770-201ENST00000390219 98 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 CNN2P11-201ENST00000429351 262 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 KRT18P2-201ENST00000447938 1258 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 ALG1L5P-201ENST00000482043 771 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AC108751.1-201ENST00000490852 363 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 YBX1P5-201ENST00000509441 847 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AP002472.1-201ENST00000577490 586 ntBASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 AC067930.6-201ENST00000623257 4947 ntBASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 AC239800.4-201ENST00000603712 296 ntBASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 AC092127.1-201ENST00000567093 3455 ntBASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CCM2LQ9NUG4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCM2LQ9NUG4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CCM2LQ9NUG4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCM2LQ9NUG4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCM2LQ9NUG4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms