Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AL391005.1-201ENST00000623953 2435 ntBASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 INTS4P2-202ENST00000614726 2019 ntBASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 SOCS2P1-201ENST00000417727 557 ntBASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AL118558.3-201ENST00000607414 1079 ntBASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 AC244669.2-201ENST00000612320 853 ntBASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
PDLIM7Q9NR12 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 AC026691.1-201ENST00000602502 2017 ntBASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 DUX4L45-201ENST00000566406 1057 ntBASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 MIR4313-201ENST00000580760 101 ntBASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM7Q9NR12 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms