Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 KRT17P8-201ENST00000540749 863 ntBASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.02□□□□□ -0.17
KIAA1549Q9HCM3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 TMBIM7P-203ENST00000641617 1718 ntBASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 RNU1-114P-201ENST00000365297 166 ntBASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 RN7SL752P-201ENST00000463779 287 ntBASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 GNRHR2-203ENST00000581100 1187 ntBASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 INTS4P2-202ENST00000614726 2019 ntBASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KIAA1549Q9HCM3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KIAA1549Q9HCM3 CICP13-201ENST00000422015 2789 ntBASIC14□□□□□ -0.17
KIAA1549Q9HCM3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms