Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 ARSEP1-201ENST00000420443 635 ntBASIC18.46■□□□□ 0.55
SLF1Q9BQI6 RPL13P2-201ENST00000440687 659 ntBASIC18.46■□□□□ 0.55
SLF1Q9BQI6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 AL359881.2-201ENST00000602973 570 ntBASIC18.46■□□□□ 0.55
SLF1Q9BQI6 TMEM261P1-201ENST00000604899 340 ntBASIC18.46■□□□□ 0.55
SLF1Q9BQI6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLF1Q9BQI6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
SLF1Q9BQI6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.46■□□□□ 0.54
SLF1Q9BQI6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.46■□□□□ 0.54
SLF1Q9BQI6 AP001282.1-201ENST00000531301 1499 ntBASIC18.46■□□□□ 0.54
SLF1Q9BQI6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 GPR53P-205ENST00000457298 1084 ntBASIC18.45■□□□□ 0.54
SLF1Q9BQI6 RN7SL837P-201ENST00000463010 287 ntBASIC18.45■□□□□ 0.54
SLF1Q9BQI6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 MIR8072-201ENST00000614241 80 ntBASIC18.45■□□□□ 0.54
SLF1Q9BQI6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 PAUPAR-201ENST00000630360 2965 ntBASIC18.45■□□□□ 0.54
SLF1Q9BQI6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLF1Q9BQI6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 HYMAI-201ENST00000635591 3347 ntBASIC18.44■□□□□ 0.54
SLF1Q9BQI6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 HAUS4P1-201ENST00000406739 1145 ntBASIC18.44■□□□□ 0.54
SLF1Q9BQI6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 AC074338.1-201ENST00000416825 156 ntBASIC18.44■□□□□ 0.54
SLF1Q9BQI6 ATP5G2P4-201ENST00000442175 420 ntBASIC18.44■□□□□ 0.54
SLF1Q9BQI6 AC104596.2-201ENST00000512793 793 ntBASIC18.44■□□□□ 0.54
SLF1Q9BQI6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.44■□□□□ 0.54
SLF1Q9BQI6 WFDC1-204ENST00000613603 549 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms