Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 AC092127.1-201ENST00000567093 3455 ntBASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 AC105250.1-201ENST00000509378 2057 ntBASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 TUBB1P2-201ENST00000422712 1306 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 TUBB1P1-201ENST00000503144 1300 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 REXO1L4P-201ENST00000605109 1937 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC092658.1-201ENST00000505836 891 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 KRT18P25-201ENST00000508931 1278 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC092933.1-201ENST00000393644 945 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC099548.2-209ENST00000480264 625 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC004066.1-201ENST00000502488 802 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 AC106820.3-201ENST00000561653 397 ntBASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP2Q96SN8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 MIR1247-201ENST00000408206 136 ntBASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 MIR1908-201ENST00000410394 80 ntBASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 MIR4538-201ENST00000581377 78 ntBASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 ECM1P1-201ENST00000604092 1279 ntBASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 AL365203.3-201ENST00000609742 2057 ntBASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP2Q96SN8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP2Q96SN8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms