Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 AC233724.13-201ENST00000598383 410 ntBASIC16.7■□□□□ 0.26
SUSD3Q96L08 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
SUSD3Q96L08 AC024909.3-201ENST00000611513 2257 ntBASIC16.7■□□□□ 0.26
SUSD3Q96L08 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUSD3Q96L08 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.69■□□□□ 0.26
SUSD3Q96L08 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 SLC25A47P1-201ENST00000531577 414 ntBASIC16.69■□□□□ 0.26
SUSD3Q96L08 TDH-203ENST00000531764 1110 ntBASIC16.69■□□□□ 0.26
SUSD3Q96L08 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 MIR6752-201ENST00000618442 71 ntBASIC16.69■□□□□ 0.26
SUSD3Q96L08 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUSD3Q96L08 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
SUSD3Q96L08 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 AC022210.1-201ENST00000449856 793 ntBASIC16.68■□□□□ 0.26
SUSD3Q96L08 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 CLUHP6-201ENST00000580789 941 ntBASIC16.68■□□□□ 0.26
SUSD3Q96L08 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 MIR6805-201ENST00000615055 62 ntBASIC16.68■□□□□ 0.26
SUSD3Q96L08 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.68■□□□□ 0.26
SUSD3Q96L08 AC084018.2-201ENST00000613093 2607 ntBASIC16.68■□□□□ 0.26
SUSD3Q96L08 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.68■□□□□ 0.26
SUSD3Q96L08 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUSD3Q96L08 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms