Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 RNF216P1-203ENST00000404404 2427 ntBASIC15.66■□□□□ 0.1
CLDN23Q96B33 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CLDN23Q96B33 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN23Q96B33 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN23Q96B33 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 RNU1-114P-201ENST00000365297 166 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 NKAIN1P1-201ENST00000435754 582 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AL133466.1-201ENST00000447582 150 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 SERPINA13P-202ENST00000478994 924 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 PRSS30P-206ENST00000641773 873 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AC026471.1-201ENST00000564629 3026 ntBASIC15.65■□□□□ 0.1
CLDN23Q96B33 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CLDN23Q96B33 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN23Q96B33 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 AC091046.1-201ENST00000331871 207 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 LDHBP1-201ENST00000455730 1119 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 AC044849.1-201ENST00000519737 1188 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 AP001505.2-201ENST00000616815 443 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN23Q96B33 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CLDN23Q96B33 UBALD1-205ENST00000590891 2641 ntBASIC15.64■□□□□ 0.09
CLDN23Q96B33 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN23Q96B33 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN23Q96B33 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN23Q96B33 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN23Q96B33 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN23Q96B33 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CLDN23Q96B33 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms