Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 RN7SL828P-201ENST00000607615 303 ntBASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 MIR6080-201ENST00000617359 66 ntBASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AC079781.4-201ENST00000641908 219 ntBASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 KRT18P13-201ENST00000400056 1290 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC136604.1-201ENST00000418535 575 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AL645939.2-201ENST00000427340 991 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC004967.1-201ENST00000453589 447 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 BANF1P1-201ENST00000553684 263 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 HNRNPUP1-201ENST00000554987 333 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC018892.3-201ENST00000623986 2499 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 AC105250.1-201ENST00000509378 2057 ntBASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF440Q8IYI8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 CICP13-201ENST00000422015 2789 ntBASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF440Q8IYI8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms