Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 AL121723.1-201ENST00000445194 1519 ntBASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 AL607033.1-201ENST00000623900 1599 ntBASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 KRT18P43-201ENST00000469825 1281 ntBASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 AC244669.2-201ENST00000612320 853 ntBASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS3Q8IXF0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC092171.3-201ENST00000610122 2651 ntBASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC016694.1-201ENST00000434179 700 ntBASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC108725.1-201ENST00000495472 409 ntBASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC020907.1-201ENST00000616460 1350 ntBASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 FLJ38576-201ENST00000623820 2459 ntBASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS3Q8IXF0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 CROCCP1-201ENST00000426910 5675 ntBASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms