Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AC011270.2-201ENST00000624293 2550 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 MIR33B-201ENST00000385104 96 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 KRT8P14-201ENST00000414254 1442 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 AC018892.3-201ENST00000623986 2499 ntBASIC16.02■□□□□ 0.16
DENND4AQ7Z401 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
DENND4AQ7Z401 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DENND4AQ7Z401 AL138799.1-201ENST00000448213 1675 ntBASIC16.01■□□□□ 0.15
DENND4AQ7Z401 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 SPTLC1P5-201ENST00000450718 252 ntBASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AC245884.6-201ENST00000515672 1067 ntBASIC16.01■□□□□ 0.15
DENND4AQ7Z401 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 RN7SL48P-201ENST00000579283 293 ntBASIC16.01■□□□□ 0.15
DENND4AQ7Z401 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 FNTAP2-201ENST00000430308 634 ntBASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AC126915.1-201ENST00000522847 1038 ntBASIC16.01■□□□□ 0.15
DENND4AQ7Z401 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.01■□□□□ 0.15
DENND4AQ7Z401 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms