Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 TUBBP5-203ENST00000508529 1334 ntBASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 FTLP10-202ENST00000505798 471 ntBASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT28Q7Z3Y7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.14■□□□□ 0.98
KRT28Q7Z3Y7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT28Q7Z3Y7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT28Q7Z3Y7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.14■□□□□ 0.98
KRT28Q7Z3Y7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 ENPP7P14-201ENST00000621765 1040 ntBASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 PRSS30P-206ENST00000641773 873 ntBASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KRT28Q7Z3Y7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT28Q7Z3Y7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRT28Q7Z3Y7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT28Q7Z3Y7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT28Q7Z3Y7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT28Q7Z3Y7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms