Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 LINC01144-201ENST00000626198 1710 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 MIR648-201ENST00000385046 94 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 YBX2P1-201ENST00000394192 760 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ACTG1P14-201ENST00000446382 1122 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 AC020658.6-201ENST00000623564 1870 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATPAF1Q5TC12 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 CICP24-201ENST00000605464 2705 ntBASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 SNX18-202ENST00000343017 3140 ntBASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 TMBIM7P-203ENST00000641617 1718 ntBASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
ATPAF1Q5TC12 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 AC092919.2-201ENST00000623631 1645 ntBASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 GPAA1P2-202ENST00000606848 1787 ntBASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms