Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 COX5BP8-201ENST00000416911 349 ntBASIC21.78■■□□□ 1.08
CDCA8Q53HL2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 GAPDHP21-201ENST00000450301 1010 ntBASIC21.78■■□□□ 1.08
CDCA8Q53HL2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 WASH4P-201ENST00000564273 1246 ntBASIC21.78■■□□□ 1.08
CDCA8Q53HL2 BRI3BPP1-201ENST00000594224 787 ntBASIC21.78■■□□□ 1.08
CDCA8Q53HL2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 AL365203.3-201ENST00000609742 2057 ntBASIC21.78■■□□□ 1.08
CDCA8Q53HL2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AC011495.1-201ENST00000498085 584 ntBASIC21.77■■□□□ 1.08
CDCA8Q53HL2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDCA8Q53HL2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 ILF3-AS1-201ENST00000591501 1983 ntBASIC21.76■■□□□ 1.07
CDCA8Q53HL2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 CTBP2P3-201ENST00000585629 1255 ntBASIC21.76■■□□□ 1.07
CDCA8Q53HL2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 AP005117.1-202ENST00000581724 1908 ntBASIC21.76■■□□□ 1.07
CDCA8Q53HL2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 AC063926.2-201ENST00000623766 1308 ntBASIC21.76■■□□□ 1.07
CDCA8Q53HL2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDCA8Q53HL2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms