Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH12P55289 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDH12P55289 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 IL9RP2-201ENST00000423948 1312 ntBASIC14.89□□□□□ -0.03
CDH12P55289 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CDH12P55289 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 AC073439.1-201ENST00000624121 1774 ntBASIC14.88□□□□□ -0.03
CDH12P55289 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 AC105250.1-201ENST00000509378 2057 ntBASIC14.88□□□□□ -0.03
CDH12P55289 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.88□□□□□ -0.03
CDH12P55289 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH12P55289 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.88□□□□□ -0.03
CDH12P55289 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDH12P55289 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH12P55289 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH12P55289 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 OR2I1P-210ENST00000642037 4691 ntBASIC14.88□□□□□ -0.03
CDH12P55289 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH12P55289 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH12P55289 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH12P55289 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CDH12P55289 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH12P55289 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH12P55289 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH12P55289 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH12P55289 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CDH12P55289 AC134407.2-201ENST00000625089 1978 ntBASIC14.87□□□□□ -0.03
CDH12P55289 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH12P55289 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH12P55289 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH12P55289 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH12P55289 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms