Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.49■□□□□ 0.39
PMS1P54277 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.49■□□□□ 0.39
PMS1P54277 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PMS1P54277 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMS1P54277 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.49■□□□□ 0.39
PMS1P54277 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.49■□□□□ 0.39
PMS1P54277 AC018529.1-201ENST00000613063 361 ntBASIC17.49■□□□□ 0.39
PMS1P54277 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.49■□□□□ 0.39
PMS1P54277 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
PMS1P54277 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMS1P54277 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMS1P54277 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PMS1P54277 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PMS1P54277 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.49■□□□□ 0.39
PMS1P54277 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PMS1P54277 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PMS1P54277 AL607033.1-201ENST00000623900 1599 ntBASIC17.49■□□□□ 0.39
PMS1P54277 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMS1P54277 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PMS1P54277 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 RBPMS2P1-201ENST00000437762 623 ntBASIC17.48■□□□□ 0.39
PMS1P54277 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.48■□□□□ 0.39
PMS1P54277 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.48■□□□□ 0.39
PMS1P54277 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 AC026150.2-201ENST00000564693 1156 ntBASIC17.48■□□□□ 0.39
PMS1P54277 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 AL133215.2-201ENST00000609242 977 ntBASIC17.48■□□□□ 0.39
PMS1P54277 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.48■□□□□ 0.39
PMS1P54277 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PMS1P54277 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PMS1P54277 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.48■□□□□ 0.39
PMS1P54277 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMS1P54277 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.47■□□□□ 0.39
PMS1P54277 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PMS1P54277 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PMS1P54277 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.47■□□□□ 0.39
PMS1P54277 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 UPF3AP3-201ENST00000420996 769 ntBASIC17.47■□□□□ 0.39
PMS1P54277 BX842568.4-201ENST00000421222 227 ntBASIC17.47■□□□□ 0.39
PMS1P54277 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.47■□□□□ 0.39
PMS1P54277 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.47■□□□□ 0.39
PMS1P54277 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.47■□□□□ 0.39
PMS1P54277 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.47■□□□□ 0.39
PMS1P54277 AC026979.3-201ENST00000607315 403 ntBASIC17.47■□□□□ 0.39
PMS1P54277 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.47■□□□□ 0.39
PMS1P54277 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PMS1P54277 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.47■□□□□ 0.39
PMS1P54277 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.47■□□□□ 0.39
PMS1P54277 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PMS1P54277 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PMS1P54277 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms