Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.67■□□□□ 0.1
LIMK1P53667 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.67■□□□□ 0.1
LIMK1P53667 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.66■□□□□ 0.1
LIMK1P53667 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK1P53667 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 FXNP2-201ENST00000411625 547 ntBASIC15.66■□□□□ 0.1
LIMK1P53667 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK1P53667 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LIMK1P53667 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.66■□□□□ 0.1
LIMK1P53667 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK1P53667 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.66■□□□□ 0.1
LIMK1P53667 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.66■□□□□ 0.1
LIMK1P53667 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.66■□□□□ 0.1
LIMK1P53667 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.66■□□□□ 0.1
LIMK1P53667 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.66■□□□□ 0.1
LIMK1P53667 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LIMK1P53667 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LIMK1P53667 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LIMK1P53667 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK1P53667 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
LIMK1P53667 SOCS2P1-201ENST00000417727 557 ntBASIC15.65■□□□□ 0.1
LIMK1P53667 AC026954.1-201ENST00000429771 1293 ntBASIC15.65■□□□□ 0.1
LIMK1P53667 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.65■□□□□ 0.1
LIMK1P53667 MPRIPP1-201ENST00000452433 1089 ntBASIC15.65■□□□□ 0.1
LIMK1P53667 RPL13AP25-201ENST00000484130 612 ntBASIC15.65■□□□□ 0.1
LIMK1P53667 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.65■□□□□ 0.1
LIMK1P53667 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.65■□□□□ 0.1
LIMK1P53667 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 AC092850.2-201ENST00000623821 2697 ntBASIC15.65■□□□□ 0.1
LIMK1P53667 AC024909.3-201ENST00000611513 2257 ntBASIC15.65■□□□□ 0.1
LIMK1P53667 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LIMK1P53667 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK1P53667 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK1P53667 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.64■□□□□ 0.1
LIMK1P53667 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
LIMK1P53667 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LIMK1P53667 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.64■□□□□ 0.09
LIMK1P53667 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms