Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN3P51790 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN3P51790 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN3P51790 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN3P51790 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 AL121723.1-201ENST00000445194 1519 ntBASIC17.38■□□□□ 0.37
CLCN3P51790 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 AC112492.5-201ENST00000421897 457 ntBASIC17.38■□□□□ 0.37
CLCN3P51790 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 AC007389.4-201ENST00000454674 793 ntBASIC17.38■□□□□ 0.37
CLCN3P51790 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.38■□□□□ 0.37
CLCN3P51790 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCN3P51790 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN3P51790 AC010319.3-201ENST00000597028 470 ntBASIC17.38■□□□□ 0.37
CLCN3P51790 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCN3P51790 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCN3P51790 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCN3P51790 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLCN3P51790 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CLCN3P51790 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLCN3P51790 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN3P51790 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN3P51790 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN3P51790 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN3P51790 KRT17P8-201ENST00000540749 863 ntBASIC17.37■□□□□ 0.37
CLCN3P51790 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN3P51790 AC008735.3-201ENST00000596646 500 ntBASIC17.37■□□□□ 0.37
CLCN3P51790 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN3P51790 AL049840.4-201ENST00000602422 811 ntBASIC17.37■□□□□ 0.37
CLCN3P51790 AC133539.2-201ENST00000604757 467 ntBASIC17.37■□□□□ 0.37
CLCN3P51790 AL162274.1-201ENST00000617191 1098 ntBASIC17.37■□□□□ 0.37
CLCN3P51790 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLCN3P51790 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLCN3P51790 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLCN3P51790 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN3P51790 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 AC099398.1-201ENST00000567919 2776 ntBASIC17.36■□□□□ 0.37
CLCN3P51790 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLCN3P51790 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN3P51790 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN3P51790 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms