Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
GPC3P51654 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GPC3P51654 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
GPC3P51654 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.51■□□□□ 0.39
GPC3P51654 INE1-201ENST00000456273 945 ntBASIC17.51■□□□□ 0.39
GPC3P51654 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
GPC3P51654 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.51■□□□□ 0.39
GPC3P51654 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.51■□□□□ 0.39
GPC3P51654 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.51■□□□□ 0.39
GPC3P51654 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 CTBP2P3-201ENST00000585629 1255 ntBASIC17.51■□□□□ 0.39
GPC3P51654 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC3P51654 AL391069.4-201ENST00000609583 481 ntBASIC17.51■□□□□ 0.39
GPC3P51654 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.51■□□□□ 0.39
GPC3P51654 REXO1L1P-202ENST00000608646 1974 ntBASIC17.51■□□□□ 0.39
GPC3P51654 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC3P51654 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
GPC3P51654 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC3P51654 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
GPC3P51654 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 AC010491.1-201ENST00000563101 2797 ntBASIC17.5■□□□□ 0.39
GPC3P51654 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 GK-202ENST00000378941 458 ntTSL 3 BASIC17.5■□□□□ 0.39
GPC3P51654 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
GPC3P51654 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.5■□□□□ 0.39
GPC3P51654 PHKG1P2-201ENST00000457537 863 ntBASIC17.5■□□□□ 0.39
GPC3P51654 RN7SL752P-201ENST00000463779 287 ntBASIC17.5■□□□□ 0.39
GPC3P51654 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.5■□□□□ 0.39
GPC3P51654 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.5■□□□□ 0.39
GPC3P51654 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC3P51654 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 IGHV3-72-202ENST00000621503 303 ntBASIC17.5■□□□□ 0.39
GPC3P51654 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.5■□□□□ 0.39
GPC3P51654 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC3P51654 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC3P51654 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GPC3P51654 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
GPC3P51654 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
GPC3P51654 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC3P51654 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms