Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RNF144AP50876 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF144AP50876 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF144AP50876 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.85□□□□□ -0.03
RNF144AP50876 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF144AP50876 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF144AP50876 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.85□□□□□ -0.03
RNF144AP50876 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 AL136982.4-201ENST00000437689 1740 ntBASIC14.85□□□□□ -0.03
RNF144AP50876 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF144AP50876 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF144AP50876 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 MIR346-201ENST00000362234 95 ntBASIC14.84□□□□□ -0.03
RNF144AP50876 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 AL627223.1-201ENST00000416693 442 ntBASIC14.84□□□□□ -0.03
RNF144AP50876 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.84□□□□□ -0.03
RNF144AP50876 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RNF144AP50876 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF144AP50876 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 AL365330.1-201ENST00000607459 531 ntBASIC14.84□□□□□ -0.03
RNF144AP50876 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RNF144AP50876 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF144AP50876 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF144AP50876 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RNF144AP50876 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF144AP50876 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNF144AP50876 AC073347.1-201ENST00000421633 2643 ntBASIC14.83□□□□□ -0.03
RNF144AP50876 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.83□□□□□ -0.03
RNF144AP50876 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.83□□□□□ -0.03
RNF144AP50876 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF144AP50876 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms