Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 PIN1P1-201ENST00000412108 996 ntBASIC16.78■□□□□ 0.28
TUBP50607 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBP50607 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBP50607 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 SDHAP3-202ENST00000515467 728 ntBASIC16.78■□□□□ 0.28
TUBP50607 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.78■□□□□ 0.28
TUBP50607 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBP50607 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 AL513523.2-202ENST00000427283 2040 ntBASIC16.78■□□□□ 0.28
TUBP50607 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 CYP2T1P-202ENST00000641596 2535 ntBASIC16.78■□□□□ 0.28
TUBP50607 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBP50607 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBP50607 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBP50607 AL596087.1-201ENST00000400979 1969 ntBASIC16.77■□□□□ 0.28
TUBP50607 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TUBP50607 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
TUBP50607 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
TUBP50607 AC114501.2-201ENST00000439631 535 ntBASIC16.77■□□□□ 0.28
TUBP50607 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.77■□□□□ 0.28
TUBP50607 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.77■□□□□ 0.28
TUBP50607 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.77■□□□□ 0.28
TUBP50607 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBP50607 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.77■□□□□ 0.28
TUBP50607 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBP50607 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TUBP50607 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TUBP50607 AC004840.1-201ENST00000636359 365 ntBASIC16.77■□□□□ 0.28
TUBP50607 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBP50607 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBP50607 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.77■□□□□ 0.27
TUBP50607 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
TUBP50607 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TUBP50607 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.77■□□□□ 0.27
TUBP50607 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBP50607 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
TUBP50607 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBP50607 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBP50607 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBP50607 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.77■□□□□ 0.27
TUBP50607 MTHFR-217ENST00000641820 1569 ntBASIC16.77■□□□□ 0.27
TUBP50607 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBP50607 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBP50607 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TUBP50607 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBP50607 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBP50607 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TUBP50607 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TUBP50607 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TUBP50607 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBP50607 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBP50607 CRB3P1-201ENST00000449338 276 ntBASIC16.76■□□□□ 0.27
TUBP50607 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBP50607 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBP50607 AC135586.1-201ENST00000539323 574 ntBASIC16.76■□□□□ 0.27
TUBP50607 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TUBP50607 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBP50607 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.76■□□□□ 0.27
TUBP50607 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms