Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CR1P49238 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC073347.1-201ENST00000421633 2643 ntBASIC14.03□□□□□ -0.16
CX3CR1P49238 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.03□□□□□ -0.16
CX3CR1P49238 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC142381.1-201ENST00000426099 345 ntBASIC14.03□□□□□ -0.16
CX3CR1P49238 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.03□□□□□ -0.16
CX3CR1P49238 ADH5P3-201ENST00000433842 1137 ntBASIC14.03□□□□□ -0.16
CX3CR1P49238 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CR1P49238 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.03□□□□□ -0.16
CX3CR1P49238 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 IGHV3-62-201ENST00000520057 340 ntBASIC14.03□□□□□ -0.16
CX3CR1P49238 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC026120.1-201ENST00000611536 926 ntBASIC14.03□□□□□ -0.16
CX3CR1P49238 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CR1P49238 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CX3CR1P49238 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CR1P49238 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CR1P49238 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CX3CR1P49238 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.02□□□□□ -0.16
CX3CR1P49238 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.02□□□□□ -0.16
CX3CR1P49238 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CX3CR1P49238 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.02□□□□□ -0.16
CX3CR1P49238 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.02□□□□□ -0.16
CX3CR1P49238 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CX3CR1P49238 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.02□□□□□ -0.16
CX3CR1P49238 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.02□□□□□ -0.16
CX3CR1P49238 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CX3CR1P49238 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CX3CR1P49238 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.02□□□□□ -0.17
CX3CR1P49238 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 AL022342.1-201ENST00000400363 863 ntBASIC14.02□□□□□ -0.17
CX3CR1P49238 MCCD1P2-201ENST00000423228 335 ntBASIC14.02□□□□□ -0.17
CX3CR1P49238 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.02□□□□□ -0.17
CX3CR1P49238 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.02□□□□□ -0.17
CX3CR1P49238 TIMM8BP1-201ENST00000452384 211 ntBASIC14.02□□□□□ -0.17
CX3CR1P49238 POLD2P1-201ENST00000511220 997 ntBASIC14.02□□□□□ -0.17
CX3CR1P49238 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
CX3CR1P49238 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.02□□□□□ -0.17
CX3CR1P49238 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.02□□□□□ -0.17
CX3CR1P49238 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CX3CR1P49238 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CX3CR1P49238 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
CX3CR1P49238 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms