Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A3P43003 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC1A3P43003 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC1A3P43003 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A3P43003 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 AC004461.1-201ENST00000412461 403 ntBASIC14.67□□□□□ -0.06
SLC1A3P43003 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AC243562.2-201ENST00000561247 970 ntBASIC14.67□□□□□ -0.06
SLC1A3P43003 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AC006538.3-201ENST00000612495 578 ntBASIC14.67□□□□□ -0.06
SLC1A3P43003 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AP3S2-216ENST00000617003 1561 ntBASIC14.67□□□□□ -0.06
SLC1A3P43003 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A3P43003 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A3P43003 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A3P43003 AL691432.1-201ENST00000596308 1422 ntBASIC14.66□□□□□ -0.06
SLC1A3P43003 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 AC136621.1-201ENST00000624017 2304 ntBASIC14.66□□□□□ -0.06
SLC1A3P43003 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC1A3P43003 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A3P43003 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A3P43003 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 AC211486.1-202ENST00000416371 468 ntBASIC14.66□□□□□ -0.06
SLC1A3P43003 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A3P43003 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A3P43003 AC211476.1-201ENST00000503899 468 ntBASIC14.66□□□□□ -0.06
SLC1A3P43003 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A3P43003 AC004835.2-201ENST00000603762 682 ntBASIC14.66□□□□□ -0.06
SLC1A3P43003 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 AP003680.1-201ENST00000598970 3660 ntBASIC14.66□□□□□ -0.06
SLC1A3P43003 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC1A3P43003 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A3P43003 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A3P43003 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms