Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP8P40818 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.43■□□□□ 0.38
USP8P40818 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.43■□□□□ 0.38
USP8P40818 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP8P40818 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
USP8P40818 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
USP8P40818 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
USP8P40818 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
USP8P40818 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.43■□□□□ 0.38
USP8P40818 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.43■□□□□ 0.38
USP8P40818 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.43■□□□□ 0.38
USP8P40818 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.43■□□□□ 0.38
USP8P40818 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.43■□□□□ 0.38
USP8P40818 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.43■□□□□ 0.38
USP8P40818 OR2I1P-210ENST00000642037 4691 ntBASIC17.43■□□□□ 0.38
USP8P40818 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.43■□□□□ 0.38
USP8P40818 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP8P40818 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
USP8P40818 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.42■□□□□ 0.38
USP8P40818 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
USP8P40818 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP8P40818 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 HAUS4P1-201ENST00000406739 1145 ntBASIC17.42■□□□□ 0.38
USP8P40818 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.42■□□□□ 0.38
USP8P40818 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.42■□□□□ 0.38
USP8P40818 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.42■□□□□ 0.38
USP8P40818 RN7SL589P-201ENST00000481268 310 ntBASIC17.42■□□□□ 0.38
USP8P40818 KRT8P48-201ENST00000515599 1220 ntBASIC17.42■□□□□ 0.38
USP8P40818 AC105233.2-201ENST00000523697 349 ntBASIC17.42■□□□□ 0.38
USP8P40818 AF228730.5-201ENST00000530288 346 ntBASIC17.42■□□□□ 0.38
USP8P40818 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.42■□□□□ 0.38
USP8P40818 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
USP8P40818 AC026120.1-201ENST00000611536 926 ntBASIC17.42■□□□□ 0.38
USP8P40818 SPTSSB-204ENST00000617024 1292 ntBASIC17.42■□□□□ 0.38
USP8P40818 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.42■□□□□ 0.38
USP8P40818 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP8P40818 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.42■□□□□ 0.38
USP8P40818 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP8P40818 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
USP8P40818 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
USP8P40818 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.41■□□□□ 0.38
USP8P40818 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 OR2I1P-209ENST00000641730 5365 ntBASIC17.41■□□□□ 0.38
USP8P40818 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
USP8P40818 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
USP8P40818 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
USP8P40818 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.41■□□□□ 0.38
USP8P40818 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.41■□□□□ 0.38
USP8P40818 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
USP8P40818 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.41■□□□□ 0.38
USP8P40818 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 IGHV3-62-201ENST00000520057 340 ntBASIC17.41■□□□□ 0.38
USP8P40818 AC243562.1-201ENST00000560672 389 ntBASIC17.41■□□□□ 0.38
USP8P40818 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.41■□□□□ 0.38
USP8P40818 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 AC008267.7-201ENST00000624570 1194 ntBASIC17.41■□□□□ 0.38
USP8P40818 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.41■□□□□ 0.38
USP8P40818 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.41■□□□□ 0.38
USP8P40818 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
USP8P40818 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP8P40818 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms