Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC006335.1-201ENST00000445200 547 ntBASIC21.96■■□□□ 1.11
CPS1P31327 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.96■■□□□ 1.11
CPS1P31327 PPY2P-201ENST00000582808 702 ntBASIC21.96■■□□□ 1.11
CPS1P31327 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPS1P31327 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.96■■□□□ 1.11
CPS1P31327 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.96■■□□□ 1.11
CPS1P31327 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPS1P31327 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.95■■□□□ 1.1
CPS1P31327 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.95■■□□□ 1.1
CPS1P31327 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPS1P31327 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.95■■□□□ 1.1
CPS1P31327 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.95■■□□□ 1.1
CPS1P31327 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.95■■□□□ 1.1
CPS1P31327 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPS1P31327 DPM3-202ENST00000368399 517 ntBASIC21.95■■□□□ 1.1
CPS1P31327 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 SLC16A6P1-201ENST00000413214 1059 ntBASIC21.95■■□□□ 1.1
CPS1P31327 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC21.95■■□□□ 1.1
CPS1P31327 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.95■■□□□ 1.1
CPS1P31327 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPS1P31327 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.95■■□□□ 1.1
CPS1P31327 AC006453.1-201ENST00000636037 1257 ntBASIC21.95■■□□□ 1.1
CPS1P31327 AL805961.1-201ENST00000642026 753 ntBASIC21.95■■□□□ 1.1
CPS1P31327 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPS1P31327 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPS1P31327 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.95■■□□□ 1.1
CPS1P31327 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.94■■□□□ 1.1
CPS1P31327 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CPS1P31327 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC21.94■■□□□ 1.1
CPS1P31327 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.94■■□□□ 1.1
CPS1P31327 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC21.94■■□□□ 1.1
CPS1P31327 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.94■■□□□ 1.1
CPS1P31327 AL136301.1-201ENST00000615830 422 ntBASIC21.94■■□□□ 1.1
CPS1P31327 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.94■■□□□ 1.1
CPS1P31327 AC025271.4-201ENST00000621477 1726 ntBASIC21.94■■□□□ 1.1
CPS1P31327 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPS1P31327 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CPS1P31327 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.93■■□□□ 1.1
CPS1P31327 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.93■■□□□ 1.1
CPS1P31327 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.93■■□□□ 1.1
CPS1P31327 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.93■■□□□ 1.1
CPS1P31327 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
CPS1P31327 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CPS1P31327 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.93■■□□□ 1.1
CPS1P31327 AC020922.3-201ENST00000595064 547 ntBASIC21.93■■□□□ 1.1
CPS1P31327 AL805961.1-203ENST00000641078 1258 ntBASIC21.93■■□□□ 1.1
CPS1P31327 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.93■■□□□ 1.1
CPS1P31327 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.93■■□□□ 1.1
CPS1P31327 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.93■■□□□ 1.1
CPS1P31327 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CPS1P31327 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPS1P31327 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.92■■□□□ 1.1
CPS1P31327 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 MIR648-201ENST00000385046 94 ntBASIC21.92■■□□□ 1.1
CPS1P31327 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CPS1P31327 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.92■■□□□ 1.1
CPS1P31327 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPS1P31327 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CPS1P31327 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CPS1P31327 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
CPS1P31327 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CPS1P31327 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.92■■□□□ 1.1
CPS1P31327 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21.92■■□□□ 1.1
CPS1P31327 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CPS1P31327 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms