Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.68□□□□□ -0.22
CD40P25942 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.68□□□□□ -0.22
CD40P25942 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CD40P25942 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.68□□□□□ -0.22
CD40P25942 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 RN7SL752P-201ENST00000463779 287 ntBASIC13.68□□□□□ -0.22
CD40P25942 AC011495.1-201ENST00000498085 584 ntBASIC13.68□□□□□ -0.22
CD40P25942 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 AC036164.1-201ENST00000570544 333 ntBASIC13.68□□□□□ -0.22
CD40P25942 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.68□□□□□ -0.22
CD40P25942 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CD40P25942 AL158212.4-201ENST00000624062 1286 ntBASIC13.68□□□□□ -0.22
CD40P25942 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CD40P25942 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD40P25942 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40P25942 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD40P25942 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD40P25942 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 AC006449.5-201ENST00000610658 2098 ntBASIC13.67□□□□□ -0.22
CD40P25942 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40P25942 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD40P25942 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD40P25942 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.67□□□□□ -0.22
CD40P25942 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD40P25942 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.67□□□□□ -0.22
CD40P25942 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 RN7SL399P-201ENST00000471648 279 ntBASIC13.67□□□□□ -0.22
CD40P25942 ELK1P1-201ENST00000485699 580 ntBASIC13.67□□□□□ -0.22
CD40P25942 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.67□□□□□ -0.22
CD40P25942 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.67□□□□□ -0.22
CD40P25942 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.67□□□□□ -0.22
CD40P25942 AC097359.3-201ENST00000603982 1210 ntBASIC13.67□□□□□ -0.22
CD40P25942 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD40P25942 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD40P25942 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 PCDH8P1-201ENST00000428983 2773 ntBASIC13.67□□□□□ -0.22
CD40P25942 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD40P25942 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 AC018892.3-201ENST00000623986 2499 ntBASIC13.67□□□□□ -0.22
CD40P25942 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.67□□□□□ -0.22
CD40P25942 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40P25942 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40P25942 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40P25942 AL607033.1-201ENST00000623900 1599 ntBASIC13.66□□□□□ -0.22
CD40P25942 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40P25942 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40P25942 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms