Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.39■□□□□ 0.54
ATP2B1P20020 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2B1P20020 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2B1P20020 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2B1P20020 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2B1P20020 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP2B1P20020 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ATP2B1P20020 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2B1P20020 AP001160.2-201ENST00000596071 487 ntBASIC18.39■□□□□ 0.53
ATP2B1P20020 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATP2B1P20020 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2B1P20020 AL691432.1-201ENST00000596308 1422 ntBASIC18.39■□□□□ 0.53
ATP2B1P20020 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B1P20020 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATP2B1P20020 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 BNIP3P1-202ENST00000550043 1585 ntBASIC18.38■□□□□ 0.53
ATP2B1P20020 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2B1P20020 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ATP2B1P20020 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2B1P20020 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC023141.5-201ENST00000458585 616 ntBASIC18.38■□□□□ 0.53
ATP2B1P20020 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2B1P20020 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC026150.2-201ENST00000564693 1156 ntBASIC18.38■□□□□ 0.53
ATP2B1P20020 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2B1P20020 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC027612.4-201ENST00000605371 583 ntBASIC18.38■□□□□ 0.53
ATP2B1P20020 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
ATP2B1P20020 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.38■□□□□ 0.53
ATP2B1P20020 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2B1P20020 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2B1P20020 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
ATP2B1P20020 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATP2B1P20020 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2B1P20020 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2B1P20020 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATP2B1P20020 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms