Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FAM8A4P-201ENST00000435433 1213 ntBASIC9.65□□□□□ -0.86
APOBP04114 POM121L9P-203ENST00000441984 1285 ntBASIC9.65□□□□□ -0.86
APOBP04114 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC9.65□□□□□ -0.86
APOBP04114 AL022344.2-201ENST00000568976 968 ntBASIC9.65□□□□□ -0.86
APOBP04114 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.65□□□□□ -0.86
APOBP04114 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC9.65□□□□□ -0.86
APOBP04114 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC9.65□□□□□ -0.86
APOBP04114 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
APOBP04114 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC9.65□□□□□ -0.87
APOBP04114 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC9.65□□□□□ -0.87
APOBP04114 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC9.65□□□□□ -0.87
APOBP04114 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC9.65□□□□□ -0.87
APOBP04114 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC9.65□□□□□ -0.87
APOBP04114 AC005740.2-201ENST00000511085 419 ntBASIC9.65□□□□□ -0.87
APOBP04114 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC9.65□□□□□ -0.87
APOBP04114 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC9.65□□□□□ -0.87
APOBP04114 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC9.65□□□□□ -0.87
APOBP04114 UBL5-208ENST00000593087 320 ntTSL 3 BASIC9.65□□□□□ -0.87
APOBP04114 AC004466.1-201ENST00000599515 1080 ntBASIC9.65□□□□□ -0.87
APOBP04114 AC091544.8-201ENST00000619490 361 ntBASIC9.65□□□□□ -0.87
APOBP04114 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
APOBP04114 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
APOBP04114 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AC018470.1-201ENST00000624790 3129 ntBASIC9.64□□□□□ -0.87
APOBP04114 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 FLII-221ENST00000578558 2377 ntTSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
APOBP04114 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.64□□□□□ -0.87
APOBP04114 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 ZACNP1-201ENST00000612259 710 ntBASIC9.64□□□□□ -0.87
APOBP04114 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AC011676.5-201ENST00000624864 2660 ntBASIC9.64□□□□□ -0.87
APOBP04114 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 AL645608.8-201ENST00000606034 2086 ntBASIC9.64□□□□□ -0.87
APOBP04114 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 PPOX-204ENST00000462866 473 ntTSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 RPL18P13-201ENST00000478088 569 ntBASIC9.64□□□□□ -0.87
APOBP04114 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 EID1-202ENST00000560490 584 ntTSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 AC009955.4-201ENST00000597192 544 ntBASIC9.64□□□□□ -0.87
APOBP04114 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 KRT8P4-201ENST00000509735 1454 ntBASIC9.64□□□□□ -0.87
APOBP04114 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AL133267.1-201ENST00000398220 340 ntBASIC9.64□□□□□ -0.87
APOBP04114 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC9.64□□□□□ -0.87
APOBP04114 AC106794.1-201ENST00000506935 792 ntBASIC9.64□□□□□ -0.87
APOBP04114 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
APOBP04114 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC9.64□□□□□ -0.87
APOBP04114 E2F3P2-201ENST00000447755 1422 ntBASIC9.64□□□□□ -0.87
APOBP04114 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
APOBP04114 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
APOBP04114 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
APOBP04114 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
APOBP04114 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
APOBP04114 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
APOBP04114 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC9.63□□□□□ -0.87
APOBP04114 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms