Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.89■□□□□ 0.61
MBD4O95243 AC005225.4-201ENST00000557330 545 ntBASIC18.89■□□□□ 0.61
MBD4O95243 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD4O95243 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.89■□□□□ 0.61
MBD4O95243 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD4O95243 AC027307.3-201ENST00000594262 1100 ntBASIC18.89■□□□□ 0.61
MBD4O95243 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD4O95243 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
MBD4O95243 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.89■□□□□ 0.61
MBD4O95243 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD4O95243 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD4O95243 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD4O95243 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD4O95243 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD4O95243 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD4O95243 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.89■□□□□ 0.61
MBD4O95243 PRAL-201ENST00000624952 3286 ntBASIC18.89■□□□□ 0.61
MBD4O95243 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD4O95243 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MBD4O95243 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD4O95243 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 MYCLP2-201ENST00000449268 967 ntBASIC18.88■□□□□ 0.61
MBD4O95243 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD4O95243 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD4O95243 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD4O95243 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.88■□□□□ 0.61
MBD4O95243 AL596325.1-201ENST00000563991 1082 ntBASIC18.88■□□□□ 0.61
MBD4O95243 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.88■□□□□ 0.61
MBD4O95243 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.88■□□□□ 0.61
MBD4O95243 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD4O95243 AC093726.1-201ENST00000608064 963 ntBASIC18.88■□□□□ 0.61
MBD4O95243 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD4O95243 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MBD4O95243 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD4O95243 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD4O95243 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD4O95243 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MBD4O95243 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD4O95243 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
MBD4O95243 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
MBD4O95243 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
MBD4O95243 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD4O95243 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 ELK1P1-201ENST00000485699 580 ntBASIC18.87■□□□□ 0.61
MBD4O95243 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD4O95243 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD4O95243 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.87■□□□□ 0.61
MBD4O95243 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD4O95243 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MBD4O95243 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD4O95243 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 AL365203.3-201ENST00000609742 2057 ntBASIC18.86■□□□□ 0.61
MBD4O95243 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD4O95243 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD4O95243 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms