Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 PCDHB19P-201ENST00000570871 2371 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CSPG5O95196 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSPG5O95196 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.08■□□□□ 0.33
CSPG5O95196 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSPG5O95196 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.08■□□□□ 0.32
CSPG5O95196 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.08■□□□□ 0.32
CSPG5O95196 HAUS4P1-201ENST00000406739 1145 ntBASIC17.08■□□□□ 0.32
CSPG5O95196 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.08■□□□□ 0.32
CSPG5O95196 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.08■□□□□ 0.32
CSPG5O95196 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 AL359711.2-201ENST00000563105 872 ntBASIC17.08■□□□□ 0.32
CSPG5O95196 RRP7BP-205ENST00000566851 833 ntBASIC17.08■□□□□ 0.32
CSPG5O95196 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.08■□□□□ 0.32
CSPG5O95196 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.08■□□□□ 0.32
CSPG5O95196 AC244093.1-201ENST00000610837 814 ntBASIC17.08■□□□□ 0.32
CSPG5O95196 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CSPG5O95196 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CSPG5O95196 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CSPG5O95196 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSPG5O95196 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.07■□□□□ 0.32
CSPG5O95196 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CSPG5O95196 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.07■□□□□ 0.32
CSPG5O95196 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CSPG5O95196 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.07■□□□□ 0.32
CSPG5O95196 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.07■□□□□ 0.32
CSPG5O95196 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.07■□□□□ 0.32
CSPG5O95196 AC133539.2-201ENST00000604757 467 ntBASIC17.07■□□□□ 0.32
CSPG5O95196 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.07■□□□□ 0.32
CSPG5O95196 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CSPG5O95196 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.07■□□□□ 0.32
CSPG5O95196 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSPG5O95196 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
CSPG5O95196 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSPG5O95196 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CSPG5O95196 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSPG5O95196 AZGP1P1-201ENST00000411909 902 ntBASIC17.06■□□□□ 0.32
CSPG5O95196 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.06■□□□□ 0.32
CSPG5O95196 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.06■□□□□ 0.32
CSPG5O95196 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms