Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.4■□□□□ 0.06
SLC28A2O43868 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SLC28A2O43868 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.39■□□□□ 0.06
SLC28A2O43868 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC28A2O43868 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC28A2O43868 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC28A2O43868 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SLC28A2O43868 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.39■□□□□ 0.05
SLC28A2O43868 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SLC28A2O43868 AL603832.2-201ENST00000566195 2125 ntBASIC15.39■□□□□ 0.05
SLC28A2O43868 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.39■□□□□ 0.05
SLC28A2O43868 AC132938.2-201ENST00000579188 680 ntBASIC15.39■□□□□ 0.05
SLC28A2O43868 MIR4515-201ENST00000584082 81 ntBASIC15.39■□□□□ 0.05
SLC28A2O43868 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 AL591163.1-201ENST00000641757 987 ntBASIC15.39■□□□□ 0.05
SLC28A2O43868 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC28A2O43868 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SLC28A2O43868 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC28A2O43868 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC28A2O43868 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC28A2O43868 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC28A2O43868 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC28A2O43868 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC28A2O43868 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC28A2O43868 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC28A2O43868 AC004945.1-201ENST00000416738 983 ntBASIC15.38■□□□□ 0.05
SLC28A2O43868 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC28A2O43868 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.38■□□□□ 0.05
SLC28A2O43868 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC28A2O43868 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC28A2O43868 AC092552.1-201ENST00000547243 906 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms