Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRRM4A7MD48 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRRM4A7MD48 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
SRRM4A7MD48 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SRRM4A7MD48 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.83□□□□□ -0.35
SRRM4A7MD48 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.83□□□□□ -0.35
SRRM4A7MD48 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.35
SRRM4A7MD48 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SRRM4A7MD48 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 FAM58DP-201ENST00000428076 619 ntBASIC12.83□□□□□ -0.36
SRRM4A7MD48 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 RARRES2P9-201ENST00000565168 469 ntBASIC12.83□□□□□ -0.36
SRRM4A7MD48 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 MIR4469-201ENST00000583919 79 ntBASIC12.83□□□□□ -0.36
SRRM4A7MD48 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRRM4A7MD48 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SRRM4A7MD48 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 AC005237.2-201ENST00000434368 219 ntBASIC12.82□□□□□ -0.36
SRRM4A7MD48 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.82□□□□□ -0.36
SRRM4A7MD48 YBX1P5-201ENST00000509441 847 ntBASIC12.82□□□□□ -0.36
SRRM4A7MD48 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.82□□□□□ -0.36
SRRM4A7MD48 AL513210.1-201ENST00000629608 234 ntBASIC12.82□□□□□ -0.36
SRRM4A7MD48 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SRRM4A7MD48 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms