Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 PRAL-201ENST00000624952 3286 ntBASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 AL596087.1-201ENST00000400979 1969 ntBASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 AC132872.4-202ENST00000622924 2756 ntBASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 PAUPAR-201ENST00000630360 2965 ntBASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FNDC3AQ9Y2H6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
FNDC3AQ9Y2H6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 HLA-V-204ENST00000476601 1289 ntBASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FNDC3AQ9Y2H6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms