Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AL591846.1-201ENST00000451736 433 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 AC093433.1-201ENST00000458048 571 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 AP006547.1-201ENST00000563435 692 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 MIR4741-201ENST00000579822 90 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 MIR5572-201ENST00000583188 137 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 AC005695.3-201ENST00000614522 232 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 TNRC18P3-201ENST00000441896 2691 ntBASIC15.74■□□□□ 0.11
NCDNQ9UBB6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AHCYP2-201ENST00000430630 1300 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 KRT8P19-201ENST00000551916 1455 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 MTX1P1-201ENST00000440904 838 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 BX284668.4-201ENST00000453917 508 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 HIST2H2BC-201ENST00000498492 580 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AC104982.3-201ENST00000581995 514 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 MSTO2P-201ENST00000314835 1709 ntBASIC15.73■□□□□ 0.11
NCDNQ9UBB6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCDNQ9UBB6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.72■□□□□ 0.11
NCDNQ9UBB6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 EEF1DP1-201ENST00000585891 896 ntBASIC15.72■□□□□ 0.11
NCDNQ9UBB6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms