Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 AC126335.2-201ENST00000623362 4637 ntBASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 RNU1-129P-201ENST00000384064 167 ntBASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 AC093909.1-201ENST00000504731 1122 ntBASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 U1.21-201ENST00000580816 167 ntBASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PCDHB16Q9NRJ7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.96□□□□□ -0.18
PCDHB16Q9NRJ7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AC069224.1-201ENST00000566372 1715 ntBASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AL513480.1-201ENST00000451731 511 ntBASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AL773604.1-201ENST00000617417 272 ntBASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AC004790.2-201ENST00000623588 572 ntBASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDHB16Q9NRJ7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC112504.1-201ENST00000623415 1841 ntBASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms