Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 AL118508.1-201ENST00000613502 2345 ntBASIC17.09■□□□□ 0.33
NXF3Q9H4D5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 ARSEP1-201ENST00000420443 635 ntBASIC17.09■□□□□ 0.33
NXF3Q9H4D5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 AL442647.2-201ENST00000429864 857 ntBASIC17.09■□□□□ 0.33
NXF3Q9H4D5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 AL121723.1-201ENST00000445194 1519 ntBASIC17.09■□□□□ 0.33
NXF3Q9H4D5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 AP003680.1-201ENST00000598970 3660 ntBASIC17.09■□□□□ 0.33
NXF3Q9H4D5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NXF3Q9H4D5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 CYP2T1P-202ENST00000641596 2535 ntBASIC17.08■□□□□ 0.33
NXF3Q9H4D5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NXF3Q9H4D5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 AC079776.1-201ENST00000401540 1152 ntBASIC17.08■□□□□ 0.32
NXF3Q9H4D5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 GPR53P-205ENST00000457298 1084 ntBASIC17.08■□□□□ 0.32
NXF3Q9H4D5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 AL359711.2-201ENST00000563105 872 ntBASIC17.08■□□□□ 0.32
NXF3Q9H4D5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 AC024909.3-201ENST00000611513 2257 ntBASIC17.08■□□□□ 0.32
NXF3Q9H4D5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.08■□□□□ 0.32
NXF3Q9H4D5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NXF3Q9H4D5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms