Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.34■□□□□ 0.21
CDCA3Q99618 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.34■□□□□ 0.21
CDCA3Q99618 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CDCA3Q99618 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.34■□□□□ 0.21
CDCA3Q99618 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CDCA3Q99618 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDCA3Q99618 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDCA3Q99618 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDCA3Q99618 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CDCA3Q99618 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.33■□□□□ 0.21
CDCA3Q99618 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDCA3Q99618 ME2P1-201ENST00000426028 1970 ntBASIC16.33■□□□□ 0.21
CDCA3Q99618 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.33■□□□□ 0.21
CDCA3Q99618 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDCA3Q99618 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDCA3Q99618 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CDCA3Q99618 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDCA3Q99618 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.33■□□□□ 0.2
CDCA3Q99618 MIR648-201ENST00000385046 94 ntBASIC16.33■□□□□ 0.2
CDCA3Q99618 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CDCA3Q99618 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.33■□□□□ 0.2
CDCA3Q99618 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.33■□□□□ 0.2
CDCA3Q99618 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.33■□□□□ 0.2
CDCA3Q99618 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.33■□□□□ 0.2
CDCA3Q99618 ECM1P1-201ENST00000604092 1279 ntBASIC16.33■□□□□ 0.2
CDCA3Q99618 AC244157.2-201ENST00000616239 1006 ntBASIC16.33■□□□□ 0.2
CDCA3Q99618 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 UBALD1-205ENST00000590891 2641 ntBASIC16.33■□□□□ 0.2
CDCA3Q99618 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 PKD1P1-201ENST00000458669 6805 ntBASIC16.33■□□□□ 0.2
CDCA3Q99618 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCA3Q99618 AC011477.6-201ENST00000604980 1927 ntBASIC16.33■□□□□ 0.2
CDCA3Q99618 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCA3Q99618 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCA3Q99618 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.33■□□□□ 0.2
CDCA3Q99618 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCA3Q99618 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 AC018470.1-201ENST00000624790 3129 ntBASIC16.32■□□□□ 0.2
CDCA3Q99618 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CDCA3Q99618 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CDCA3Q99618 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCA3Q99618 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.32■□□□□ 0.2
CDCA3Q99618 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCA3Q99618 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCA3Q99618 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCA3Q99618 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.32■□□□□ 0.2
CDCA3Q99618 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCA3Q99618 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCA3Q99618 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.32■□□□□ 0.2
CDCA3Q99618 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCA3Q99618 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCA3Q99618 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDCA3Q99618 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCA3Q99618 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDCA3Q99618 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCA3Q99618 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCA3Q99618 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCA3Q99618 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCA3Q99618 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCA3Q99618 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CDCA3Q99618 AP001094.4-201ENST00000579008 2176 ntBASIC16.31■□□□□ 0.2
CDCA3Q99618 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCA3Q99618 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms