Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 AC015818.8-201ENST00000587907 1519 ntBASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 SLC25A24P2-201ENST00000415059 510 ntBASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 MTX1P1-201ENST00000440904 838 ntBASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 AC114812.1-204ENST00000449669 728 ntBASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 AC106872.11-201ENST00000605838 421 ntBASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 FLJ38576-201ENST00000623820 2459 ntBASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.2■□□□□ 0.66
CRAMP1Q96RY5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 AC104982.3-201ENST00000581995 514 ntBASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CRAMP1Q96RY5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 AC138028.6-201ENST00000616106 1482 ntBASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 AC092506.1-202ENST00000401022 528 ntBASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 KLF2P2-201ENST00000416807 1039 ntBASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.18■□□□□ 0.66
CRAMP1Q96RY5 AC091804.1-201ENST00000486888 567 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms