Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 AL138828.2-201ENST00000615812 383 ntBASIC18.49■□□□□ 0.55
PGBD1Q96JS3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 AC006486.2-201ENST00000624246 2199 ntBASIC18.48■□□□□ 0.55
PGBD1Q96JS3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 AC055876.3-201ENST00000431496 288 ntBASIC18.48■□□□□ 0.55
PGBD1Q96JS3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 AC138649.4-201ENST00000612222 287 ntBASIC18.48■□□□□ 0.55
PGBD1Q96JS3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PGBD1Q96JS3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.47■□□□□ 0.55
PGBD1Q96JS3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AC011477.6-201ENST00000604980 1927 ntBASIC18.47■□□□□ 0.55
PGBD1Q96JS3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AC023157.3-201ENST00000619086 2088 ntBASIC18.47■□□□□ 0.55
PGBD1Q96JS3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AL365330.1-201ENST00000607459 531 ntBASIC18.47■□□□□ 0.55
PGBD1Q96JS3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD1Q96JS3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PGBD1Q96JS3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms