Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST2Q8NFU1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SLED1-202ENST00000512051 380 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC023310.3-201ENST00000557027 670 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC100756.1-201ENST00000562736 682 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC138749.3-201ENST00000567691 622 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 TP53TG3HP-202ENST00000569755 579 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AC116165.1-201ENST00000611806 668 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 AL603832.2-201ENST00000566195 2125 ntBASIC17.08■□□□□ 0.32
BEST2Q8NFU1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST2Q8NFU1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 AL607033.1-201ENST00000623900 1599 ntBASIC17.07■□□□□ 0.32
BEST2Q8NFU1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 SLC7A15P-201ENST00000424028 1363 ntBASIC17.07■□□□□ 0.32
BEST2Q8NFU1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 AL513523.2-202ENST00000427283 2040 ntBASIC17.07■□□□□ 0.32
BEST2Q8NFU1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 AC112504.1-201ENST00000623415 1841 ntBASIC17.07■□□□□ 0.32
BEST2Q8NFU1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BEST2Q8NFU1 AC024909.3-201ENST00000611513 2257 ntBASIC17.07■□□□□ 0.32
BEST2Q8NFU1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST2Q8NFU1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms