Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 BANF1P1-201ENST00000553684 263 ntBASIC15.07■□□□□ 0
SIMC1Q8NDZ2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 AC018892.3-201ENST00000623986 2499 ntBASIC15.07■□□□□ 0
SIMC1Q8NDZ2 AC104581.4-201ENST00000623126 3052 ntBASIC15.07■□□□□ 0
SIMC1Q8NDZ2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.07■□□□□ 0
SIMC1Q8NDZ2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 HAUS4P1-201ENST00000406739 1145 ntBASIC15.06■□□□□ 0
SIMC1Q8NDZ2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SIMC1Q8NDZ2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
SIMC1Q8NDZ2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 AC024267.1-201ENST00000582320 895 ntBASIC15.05■□□□□ -0
SIMC1Q8NDZ2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.05■□□□□ -0
SIMC1Q8NDZ2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms