Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 AC018892.3-201ENST00000623986 2499 ntBASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NPAS4Q8IUM7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 BCYRN1-201ENST00000418539 200 ntBASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 AP005019.2-201ENST00000615104 511 ntBASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPAS4Q8IUM7 AC080080.1-201ENST00000625121 2420 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 KRT18P25-201ENST00000508931 1278 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AC243960.2-201ENST00000600996 747 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AC084346.2-201ENST00000607097 949 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AC011477.6-201ENST00000604980 1927 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 AC011676.5-201ENST00000624864 2660 ntBASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS4Q8IUM7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.88■□□□□ 0.29
NPAS4Q8IUM7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms